Whole-genome sequencing of pathogenic bacteria from a hospital setting - SRA

SRX21888535: Whole-genome sequencing of pathogenic bacteria from a hospital setting
1 ILLUMINA (Illumina MiSeq) run: 1.1M spots, 638.3M bases, 355.9Mb downloads

Design: Illumina library prep using Nextera DNA UD indices

Submitted by: Brigham and Women's Hospital

Study: Antimicrobial Surveillance from Brigham & Women's Hospital, Boston MA

PRJNA278886 • SRP056445 • All experiments • All runs

show Abstracthide Abstract

The goal of this project is to identify carbapenemases and other beta-lactamases in clinical isolates with WGS and assess their mobilization potential . The results can support national surveillance of clinically identified pathogens and provide invaluable information to infection control in hospital.

Sample:

SAMN37516935 • SRS18979521 • All experiments • All runs

Organism: Klebsiella pneumoniae

Library:

Name: BWH_1513_K_pne

Instrument: Illumina MiSeq

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Runs: 1 run, 1.1M spots, 638.3M bases, 355.9Mb

Run	# of Spots	# of Bases	Size	Published
SRR26176509	1,146,100	638.3M	355.9Mb	2023-09-26

ID:: 29782177

SRA

Sequence Read Archive

Result Filters

Send to:

Supplemental Content

Related information

Recent activity